Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 AP000997.3-201ENST00000623333 2250 ntBASIC17.32■□□□□ 0.36
RABIFP47224 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RABIFP47224 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RABIFP47224 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 MYCLP1-201ENST00000372451 1075 ntBASIC17.32■□□□□ 0.36
RABIFP47224 AC073621.1-201ENST00000392730 636 ntBASIC17.32■□□□□ 0.36
RABIFP47224 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.32■□□□□ 0.36
RABIFP47224 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.32■□□□□ 0.36
RABIFP47224 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RABIFP47224 AC002558.1-201ENST00000488906 803 ntBASIC17.32■□□□□ 0.36
RABIFP47224 STK19B-204ENST00000512515 211 ntBASIC17.32■□□□□ 0.36
RABIFP47224 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
RABIFP47224 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.32■□□□□ 0.36
RABIFP47224 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.32■□□□□ 0.36
RABIFP47224 STK25P1-201ENST00000585406 838 ntBASIC17.32■□□□□ 0.36
RABIFP47224 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RABIFP47224 AC004706.3-202ENST00000621574 984 ntBASIC17.32■□□□□ 0.36
RABIFP47224 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.32■□□□□ 0.36
RABIFP47224 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.32■□□□□ 0.36
RABIFP47224 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RABIFP47224 AC148477.5-201ENST00000625164 1645 ntBASIC17.32■□□□□ 0.36
RABIFP47224 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 KRT18P55-202ENST00000578578 1546 ntBASIC17.31■□□□□ 0.36
RABIFP47224 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.31■□□□□ 0.36
RABIFP47224 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.31■□□□□ 0.36
RABIFP47224 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
RABIFP47224 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.31■□□□□ 0.36
RABIFP47224 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RABIFP47224 AC009947.1-201ENST00000444350 727 ntBASIC17.31■□□□□ 0.36
RABIFP47224 KRT18P3-201ENST00000451602 1288 ntBASIC17.31■□□□□ 0.36
RABIFP47224 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 PGAM5P1-201ENST00000518923 814 ntBASIC17.31■□□□□ 0.36
RABIFP47224 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.31■□□□□ 0.36
RABIFP47224 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.31■□□□□ 0.36
RABIFP47224 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
RABIFP47224 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RABIFP47224 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
RABIFP47224 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RABIFP47224 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.3■□□□□ 0.36
RABIFP47224 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RABIFP47224 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RABIFP47224 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.3■□□□□ 0.36
RABIFP47224 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RABIFP47224 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RABIFP47224 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RABIFP47224 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.3■□□□□ 0.36
RABIFP47224 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RABIFP47224 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RABIFP47224 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
RABIFP47224 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.3■□□□□ 0.36
RABIFP47224 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.3■□□□□ 0.36
RABIFP47224 RNA5SP416-201ENST00000516838 111 ntBASIC17.3■□□□□ 0.36
RABIFP47224 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.3■□□□□ 0.36
RABIFP47224 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.3■□□□□ 0.36
RABIFP47224 AC139530.3-201ENST00000620344 690 ntBASIC17.3■□□□□ 0.36
RABIFP47224 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RABIFP47224 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms