Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.89■□□□□ 0.61
SSR1P43307 RASA4DP-201ENST00000460726 1199 ntBASIC18.89■□□□□ 0.61
SSR1P43307 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.89■□□□□ 0.61
SSR1P43307 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.89■□□□□ 0.61
SSR1P43307 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SSR1P43307 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SSR1P43307 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SSR1P43307 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.89■□□□□ 0.61
SSR1P43307 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SSR1P43307 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSR1P43307 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SSR1P43307 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSR1P43307 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 AL441883.1-201ENST00000566170 1045 ntBASIC18.88■□□□□ 0.61
SSR1P43307 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.88■□□□□ 0.61
SSR1P43307 AL031432.5-201ENST00000641059 760 ntBASIC18.88■□□□□ 0.61
SSR1P43307 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 AC022898.2-201ENST00000616822 1312 ntBASIC18.88■□□□□ 0.61
SSR1P43307 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSR1P43307 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.88■□□□□ 0.61
SSR1P43307 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.88■□□□□ 0.61
SSR1P43307 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSR1P43307 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR1P43307 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SSR1P43307 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR1P43307 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 AC113347.1-201ENST00000413321 391 ntBASIC18.87■□□□□ 0.61
SSR1P43307 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.87■□□□□ 0.61
SSR1P43307 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.87■□□□□ 0.61
SSR1P43307 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SSR1P43307 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SSR1P43307 AC006116.8-202ENST00000587620 1550 ntBASIC18.87■□□□□ 0.61
SSR1P43307 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SSR1P43307 AC024563.2-201ENST00000603282 481 ntBASIC18.87■□□□□ 0.61
SSR1P43307 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR1P43307 AC139887.4-201ENST00000607877 719 ntBASIC18.87■□□□□ 0.61
SSR1P43307 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.87■□□□□ 0.61
SSR1P43307 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SSR1P43307 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSR1P43307 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.87■□□□□ 0.61
SSR1P43307 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SSR1P43307 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR1P43307 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR1P43307 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.86■□□□□ 0.61
SSR1P43307 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms