Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.71■■□□□ 1.07
PDE6BP35913 BX276092.7-203ENST00000637198 1536 ntBASIC21.71■■□□□ 1.07
PDE6BP35913 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PDE6BP35913 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 PAWRP1-201ENST00000451083 565 ntBASIC21.71■■□□□ 1.07
PDE6BP35913 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 AC022145.2-201ENST00000598203 171 ntBASIC21.71■■□□□ 1.07
PDE6BP35913 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PDE6BP35913 PI4KAP1-204ENST00000612579 1703 ntBASIC21.71■■□□□ 1.07
PDE6BP35913 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.71■■□□□ 1.07
PDE6BP35913 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PDE6BP35913 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6BP35913 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.7■■□□□ 1.06
PDE6BP35913 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE6BP35913 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.7■■□□□ 1.06
PDE6BP35913 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.7■■□□□ 1.06
PDE6BP35913 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE6BP35913 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDE6BP35913 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.7■■□□□ 1.06
PDE6BP35913 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.7■■□□□ 1.06
PDE6BP35913 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.7■■□□□ 1.06
PDE6BP35913 AC023141.5-201ENST00000458585 616 ntBASIC21.7■■□□□ 1.06
PDE6BP35913 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.7■■□□□ 1.06
PDE6BP35913 AC109322.1-201ENST00000524499 1264 ntBASIC21.7■■□□□ 1.06
PDE6BP35913 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE6BP35913 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PDE6BP35913 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6BP35913 AC116562.4-201ENST00000641316 2276 ntBASIC21.69■■□□□ 1.06
PDE6BP35913 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDE6BP35913 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.69■■□□□ 1.06
PDE6BP35913 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PDE6BP35913 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
PDE6BP35913 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.69■■□□□ 1.06
PDE6BP35913 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.69■■□□□ 1.06
PDE6BP35913 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.69■■□□□ 1.06
PDE6BP35913 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.69■■□□□ 1.06
PDE6BP35913 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6BP35913 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE6BP35913 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6BP35913 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PDE6BP35913 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6BP35913 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6BP35913 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.68■■□□□ 1.06
PDE6BP35913 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE6BP35913 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PDE6BP35913 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE6BP35913 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PDE6BP35913 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE6BP35913 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE6BP35913 AC005498.2-205ENST00000593218 784 ntBASIC21.68■■□□□ 1.06
PDE6BP35913 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.68■■□□□ 1.06
PDE6BP35913 LINC00628-201ENST00000628516 1289 ntBASIC21.68■■□□□ 1.06
PDE6BP35913 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6BP35913 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6BP35913 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6BP35913 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PDE6BP35913 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE6BP35913 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.67■■□□□ 1.06
PDE6BP35913 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.67■■□□□ 1.06
PDE6BP35913 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.67■■□□□ 1.06
PDE6BP35913 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.67■■□□□ 1.06
PDE6BP35913 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.67■■□□□ 1.06
PDE6BP35913 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.67■■□□□ 1.06
PDE6BP35913 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.67■■□□□ 1.06
PDE6BP35913 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.67■■□□□ 1.06
PDE6BP35913 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.67■■□□□ 1.06
PDE6BP35913 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6BP35913 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms