Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RPA3P35244 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.93■□□□□ 0.46
RPA3P35244 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.93■□□□□ 0.46
RPA3P35244 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.93■□□□□ 0.46
RPA3P35244 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.93■□□□□ 0.46
RPA3P35244 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.93■□□□□ 0.46
RPA3P35244 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RPA3P35244 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.93■□□□□ 0.46
RPA3P35244 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.93■□□□□ 0.46
RPA3P35244 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.93■□□□□ 0.46
RPA3P35244 AC024243.1-201ENST00000609234 778 ntBASIC17.93■□□□□ 0.46
RPA3P35244 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 AL031432.5-201ENST00000641059 760 ntBASIC17.93■□□□□ 0.46
RPA3P35244 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.93■□□□□ 0.46
RPA3P35244 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.93■□□□□ 0.46
RPA3P35244 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.93■□□□□ 0.46
RPA3P35244 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
RPA3P35244 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPA3P35244 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RPA3P35244 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RPA3P35244 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.92■□□□□ 0.46
RPA3P35244 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPA3P35244 AC106886.4-201ENST00000623557 2502 ntBASIC17.92■□□□□ 0.46
RPA3P35244 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.92■□□□□ 0.46
RPA3P35244 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.92■□□□□ 0.46
RPA3P35244 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.92■□□□□ 0.46
RPA3P35244 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 RCN1P1-201ENST00000400413 996 ntBASIC17.92■□□□□ 0.46
RPA3P35244 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.92■□□□□ 0.46
RPA3P35244 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.92■□□□□ 0.46
RPA3P35244 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.92■□□□□ 0.46
RPA3P35244 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.92■□□□□ 0.46
RPA3P35244 KRT18P21-201ENST00000515767 1272 ntBASIC17.92■□□□□ 0.46
RPA3P35244 AL023973.1-201ENST00000624619 620 ntBASIC17.92■□□□□ 0.46
RPA3P35244 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPA3P35244 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RPA3P35244 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
RPA3P35244 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPA3P35244 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms