Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP24386 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP24386 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 AD000864.1-201ENST00000624076 2295 ntBASIC16.6■□□□□ 0.25
CHMP24386 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP24386 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 MIR662-201ENST00000384847 95 ntBASIC16.6■□□□□ 0.25
CHMP24386 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CHMP24386 AL645929.1-201ENST00000420084 975 ntBASIC16.6■□□□□ 0.25
CHMP24386 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP24386 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP24386 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.6■□□□□ 0.25
CHMP24386 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CHMP24386 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
CHMP24386 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP24386 OR6D1P-202ENST00000641007 5290 ntBASIC16.6■□□□□ 0.25
CHMP24386 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHMP24386 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP24386 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHMP24386 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
CHMP24386 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP24386 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP24386 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP24386 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP24386 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP24386 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP24386 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP24386 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP24386 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.59■□□□□ 0.25
CHMP24386 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP24386 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP24386 AL023806.1-201ENST00000603994 1649 ntBASIC16.59■□□□□ 0.25
CHMP24386 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP24386 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP24386 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CHMP24386 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP24386 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP24386 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP24386 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP24386 AC084018.2-201ENST00000613093 2607 ntBASIC16.58■□□□□ 0.25
CHMP24386 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP24386 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP24386 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CHMP24386 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP24386 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP24386 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP24386 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP24386 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP24386 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP24386 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP24386 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP24386 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP24386 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP24386 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
CHMP24386 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CHMP24386 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms