Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
KCNA3P22001 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
KCNA3P22001 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNA3P22001 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNA3P22001 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNA3P22001 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNA3P22001 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
KCNA3P22001 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 TUBB3P1-201ENST00000405796 1332 ntBASIC21.57■■□□□ 1.04
KCNA3P22001 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 AC009336.1-201ENST00000608941 1553 ntBASIC21.57■■□□□ 1.04
KCNA3P22001 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNA3P22001 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNA3P22001 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNA3P22001 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 PHGDH-209ENST00000641074 1780 ntBASIC21.57■■□□□ 1.04
KCNA3P22001 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNA3P22001 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNA3P22001 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNA3P22001 AL671277.1-201ENST00000429656 993 ntBASIC21.57■■□□□ 1.04
KCNA3P22001 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNA3P22001 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 AL008721.1-201ENST00000609964 604 ntBASIC21.57■■□□□ 1.04
KCNA3P22001 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
KCNA3P22001 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNA3P22001 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNA3P22001 AL590787.1-201ENST00000568856 1315 ntBASIC21.56■■□□□ 1.04
KCNA3P22001 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNA3P22001 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
KCNA3P22001 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNA3P22001 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNA3P22001 AC005237.2-201ENST00000434368 219 ntBASIC21.56■■□□□ 1.04
KCNA3P22001 FAM207CP-201ENST00000443486 507 ntBASIC21.56■■□□□ 1.04
KCNA3P22001 AL513480.1-201ENST00000451731 511 ntBASIC21.56■■□□□ 1.04
KCNA3P22001 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNA3P22001 AP001059.3-201ENST00000619053 235 ntBASIC21.56■■□□□ 1.04
KCNA3P22001 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNA3P22001 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
KCNA3P22001 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 HLA-V-201ENST00000429037 534 ntBASIC21.55■■□□□ 1.04
KCNA3P22001 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNA3P22001 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNA3P22001 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
KCNA3P22001 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
KCNA3P22001 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNA3P22001 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNA3P22001 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
KCNA3P22001 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNA3P22001 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
KCNA3P22001 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNA3P22001 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KCNA3P22001 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
KCNA3P22001 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 FO538757.1-201ENST00000623083 1397 ntBASIC21.54■■□□□ 1.04
KCNA3P22001 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 AC002056.1-201ENST00000395613 760 ntBASIC21.54■■□□□ 1.04
KCNA3P22001 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNA3P22001 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms