Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN3P20807 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CAPN3P20807 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
CAPN3P20807 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 RNF152P1-201ENST00000397754 604 ntBASIC17.09■□□□□ 0.33
CAPN3P20807 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.09■□□□□ 0.33
CAPN3P20807 ECEL1P2-202ENST00000465689 757 ntBASIC17.09■□□□□ 0.33
CAPN3P20807 SEC1P-202ENST00000473944 940 ntBASIC17.09■□□□□ 0.33
CAPN3P20807 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.09■□□□□ 0.33
CAPN3P20807 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN3P20807 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN3P20807 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.09■□□□□ 0.33
CAPN3P20807 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 AC009949.1-201ENST00000623048 1830 ntBASIC17.09■□□□□ 0.33
CAPN3P20807 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CAPN3P20807 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN3P20807 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN3P20807 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN3P20807 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.08■□□□□ 0.33
CAPN3P20807 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.08■□□□□ 0.33
CAPN3P20807 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN3P20807 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CAPN3P20807 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN3P20807 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN3P20807 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CAPN3P20807 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPN3P20807 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 AC022898.2-201ENST00000616822 1312 ntBASIC17.08■□□□□ 0.32
CAPN3P20807 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 AL450487.1-201ENST00000426799 995 ntBASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 AC007663.1-201ENST00000438948 1240 ntBASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPN3P20807 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.08■□□□□ 0.32
CAPN3P20807 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPN3P20807 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CAPN3P20807 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN3P20807 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CAPN3P20807 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPN3P20807 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN3P20807 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CAPN3P20807 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CAPN3P20807 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CAPN3P20807 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN3P20807 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN3P20807 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPN3P20807 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CAPN3P20807 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 AL031133.1-201ENST00000406807 723 ntBASIC17.07■□□□□ 0.32
CAPN3P20807 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.07■□□□□ 0.32
CAPN3P20807 CCR12P-201ENST00000446203 998 ntBASIC17.07■□□□□ 0.32
CAPN3P20807 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN3P20807 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPN3P20807 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN3P20807 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPN3P20807 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CAPN3P20807 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN3P20807 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms