Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
MT-ND3P03897 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
MT-ND3P03897 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.1■□□□□ 0.49
MT-ND3P03897 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.1■□□□□ 0.49
MT-ND3P03897 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND3P03897 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 AL138688.1-201ENST00000624851 1594 ntBASIC18.09■□□□□ 0.49
MT-ND3P03897 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
MT-ND3P03897 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.09■□□□□ 0.49
MT-ND3P03897 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.09■□□□□ 0.49
MT-ND3P03897 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.09■□□□□ 0.49
MT-ND3P03897 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MT-ND3P03897 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
MT-ND3P03897 AL024508.2-201ENST00000607749 1894 ntBASIC18.09■□□□□ 0.49
MT-ND3P03897 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MT-ND3P03897 AC124067.4-201ENST00000519691 2379 ntBASIC18.09■□□□□ 0.49
MT-ND3P03897 AC133963.1-201ENST00000504166 1679 ntBASIC18.09■□□□□ 0.49
MT-ND3P03897 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
MT-ND3P03897 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MT-ND3P03897 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.08■□□□□ 0.49
MT-ND3P03897 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MT-ND3P03897 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.08■□□□□ 0.49
MT-ND3P03897 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
MT-ND3P03897 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.08■□□□□ 0.49
MT-ND3P03897 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
MT-ND3P03897 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.08■□□□□ 0.49
MT-ND3P03897 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
MT-ND3P03897 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
MT-ND3P03897 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 DUTP2-201ENST00000519164 463 ntBASIC18.08■□□□□ 0.48
MT-ND3P03897 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.08■□□□□ 0.48
MT-ND3P03897 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.08■□□□□ 0.48
MT-ND3P03897 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.08■□□□□ 0.48
MT-ND3P03897 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.08■□□□□ 0.48
MT-ND3P03897 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.08■□□□□ 0.48
MT-ND3P03897 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MT-ND3P03897 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.08■□□□□ 0.48
MT-ND3P03897 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
MT-ND3P03897 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
MT-ND3P03897 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
MT-ND3P03897 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.07■□□□□ 0.48
MT-ND3P03897 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 AC011558.1-201ENST00000623459 338 ntBASIC18.07■□□□□ 0.48
MT-ND3P03897 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.07■□□□□ 0.48
MT-ND3P03897 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MT-ND3P03897 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND3P03897 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND3P03897 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms