Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 AL513523.2-202ENST00000427283 2040 ntBASIC13.37□□□□□ -0.27
HLA-DQA1P01909 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 CYP2T1P-202ENST00000641596 2535 ntBASIC13.37□□□□□ -0.27
HLA-DQA1P01909 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA1P01909 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 HLA-L-209ENST00000420110 1011 ntBASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 GUSBP6-202ENST00000438529 1198 ntBASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AL138781.1-201ENST00000566567 1274 ntBASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AC104771.1-201ENST00000603335 964 ntBASIC13.36□□□□□ -0.27
HLA-DQA1P01909 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AC007950.2-201ENST00000615045 2347 ntBASIC13.36□□□□□ -0.27
HLA-DQA1P01909 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 LINC00304-203ENST00000565008 1864 ntBASIC13.36□□□□□ -0.27
HLA-DQA1P01909 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DQA1P01909 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 AC006449.5-201ENST00000610658 2098 ntBASIC13.35□□□□□ -0.27
HLA-DQA1P01909 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.35□□□□□ -0.27
HLA-DQA1P01909 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DQA1P01909 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms