Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.37□□□□□ -0.27
LTAP01374 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LTAP01374 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LTAP01374 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.36□□□□□ -0.27
LTAP01374 AC097488.1-201ENST00000507834 756 ntBASIC13.36□□□□□ -0.27
LTAP01374 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.36□□□□□ -0.27
LTAP01374 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.36□□□□□ -0.27
LTAP01374 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.36□□□□□ -0.27
LTAP01374 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.36□□□□□ -0.27
LTAP01374 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 AC116353.5-201ENST00000638148 1699 ntBASIC13.36□□□□□ -0.27
LTAP01374 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LTAP01374 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.36□□□□□ -0.27
LTAP01374 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LTAP01374 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.35□□□□□ -0.27
LTAP01374 AC005915.1-201ENST00000624912 2018 ntBASIC13.35□□□□□ -0.27
LTAP01374 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LTAP01374 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LTAP01374 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.35□□□□□ -0.27
LTAP01374 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.35□□□□□ -0.27
LTAP01374 AL162727.3-201ENST00000635661 2787 ntBASIC13.35□□□□□ -0.27
LTAP01374 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.35□□□□□ -0.27
LTAP01374 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.35□□□□□ -0.27
LTAP01374 AC010240.3-201ENST00000607688 395 ntBASIC13.35□□□□□ -0.27
LTAP01374 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.35□□□□□ -0.27
LTAP01374 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.35□□□□□ -0.27
LTAP01374 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.35□□□□□ -0.27
LTAP01374 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LTAP01374 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms