Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFBP01127 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFBP01127 AC107890.1-201ENST00000422478 521 ntBASIC17.71■□□□□ 0.43
PDGFBP01127 CRB3P1-201ENST00000449338 276 ntBASIC17.71■□□□□ 0.43
PDGFBP01127 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFBP01127 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDGFBP01127 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFBP01127 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
PDGFBP01127 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFBP01127 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFBP01127 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFBP01127 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PDGFBP01127 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFBP01127 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFBP01127 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PDGFBP01127 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PDGFBP01127 LINC00982-205ENST00000420957 435 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 KRT18P32-201ENST00000424695 1287 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 AL671277.1-201ENST00000429656 993 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 AL592309.1-201ENST00000443127 649 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 SPDYE11-202ENST00000450699 704 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 AL513480.1-201ENST00000451731 511 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 AC125807.1-201ENST00000483097 614 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 IGHV3-42-201ENST00000520410 361 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.7■□□□□ 0.42
PDGFBP01127 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 SPDYE9P-201ENST00000570642 692 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.7■□□□□ 0.42
PDGFBP01127 AC099522.2-201ENST00000607001 744 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 SPDYE10P-202ENST00000612005 668 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 SPDYE8P-202ENST00000612377 668 ntBASIC17.7■□□□□ 0.42
PDGFBP01127 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PDGFBP01127 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFBP01127 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDGFBP01127 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFBP01127 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFBP01127 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PDGFBP01127 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFBP01127 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFBP01127 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.69■□□□□ 0.42
PDGFBP01127 GPS2P2-201ENST00000430745 888 ntBASIC17.69■□□□□ 0.42
PDGFBP01127 FAM185BP-201ENST00000443595 716 ntBASIC17.69■□□□□ 0.42
PDGFBP01127 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.69■□□□□ 0.42
PDGFBP01127 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDGFBP01127 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 AL512356.2-201ENST00000546955 174 ntBASIC17.69■□□□□ 0.42
PDGFBP01127 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDGFBP01127 AC019129.2-201ENST00000609837 1235 ntBASIC17.69■□□□□ 0.42
PDGFBP01127 MIR6752-201ENST00000618442 71 ntBASIC17.69■□□□□ 0.42
PDGFBP01127 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFBP01127 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDGFBP01127 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFBP01127 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFBP01127 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 AC093484.2-201ENST00000580996 2166 ntBASIC17.69■□□□□ 0.42
PDGFBP01127 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFBP01127 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFBP01127 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.68■□□□□ 0.42
PDGFBP01127 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFBP01127 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.68■□□□□ 0.42
PDGFBP01127 GMCL1P1-201ENST00000463439 1581 ntBASIC17.68■□□□□ 0.42
PDGFBP01127 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFBP01127 AC079140.1-201ENST00000508039 487 ntBASIC17.68■□□□□ 0.42
PDGFBP01127 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.68■□□□□ 0.42
PDGFBP01127 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms