Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR1AO95602 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC25.57■■□□□ 1.68
POLR1AO95602 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC25.57■■□□□ 1.68
POLR1AO95602 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
POLR1AO95602 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
POLR1AO95602 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
POLR1AO95602 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC25.57■■□□□ 1.68
POLR1AO95602 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
POLR1AO95602 AL589182.2-201ENST00000619332 1049 ntBASIC25.57■■□□□ 1.68
POLR1AO95602 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR1AO95602 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC25.56■■□□□ 1.68
POLR1AO95602 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 AC010460.3-201ENST00000511359 1579 ntBASIC25.56■■□□□ 1.68
POLR1AO95602 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC25.56■■□□□ 1.68
POLR1AO95602 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC25.56■■□□□ 1.68
POLR1AO95602 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 BAD-202ENST00000394531 631 ntTSL 3 BASIC25.56■■□□□ 1.68
POLR1AO95602 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.56■■□□□ 1.68
POLR1AO95602 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.56■■□□□ 1.68
POLR1AO95602 AC093214.1-201ENST00000511688 1107 ntBASIC25.56■■□□□ 1.68
POLR1AO95602 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC25.56■■□□□ 1.68
POLR1AO95602 AC004706.3-202ENST00000621574 984 ntBASIC25.56■■□□□ 1.68
POLR1AO95602 AC009093.7-201ENST00000623853 1223 ntBASIC25.56■■□□□ 1.68
POLR1AO95602 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
POLR1AO95602 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC25.56■■□□□ 1.68
POLR1AO95602 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
POLR1AO95602 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
POLR1AO95602 GMCL1P1-201ENST00000463439 1581 ntBASIC25.56■■□□□ 1.68
POLR1AO95602 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC25.55■■□□□ 1.68
POLR1AO95602 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 AC004817.3-201ENST00000602957 2129 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
POLR1AO95602 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 AC004461.1-201ENST00000412461 403 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 PRYP5-201ENST00000451909 266 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 SIGLEC30P-201ENST00000455569 941 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 TAF8-206ENST00000472818 719 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC25.55■■□□□ 1.68
POLR1AO95602 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 AC022145.2-201ENST00000598203 171 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 AL805961.1-202ENST00000641562 540 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 AC135776.1-201ENST00000319817 2481 ntBASIC25.55■■□□□ 1.68
POLR1AO95602 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR1AO95602 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
POLR1AO95602 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR1AO95602 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.54■■□□□ 1.68
POLR1AO95602 RPS15P9-201ENST00000494093 319 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
POLR1AO95602 MIR4745-201ENST00000577608 62 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.54■■□□□ 1.68
POLR1AO95602 AL390955.2-201ENST00000603032 514 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 AC068137.2-201ENST00000605408 478 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.54■■□□□ 1.68
POLR1AO95602 PC-214ENST00000628663 1470 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR1AO95602 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 ABALON-201ENST00000629058 1903 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR1AO95602 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
POLR1AO95602 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
POLR1AO95602 MRPL20P1-201ENST00000400819 433 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.54■■□□□ 1.68
POLR1AO95602 AC005225.4-201ENST00000557330 545 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 YTHDF3-AS1-201ENST00000603538 718 ntBASIC25.54■■□□□ 1.68
POLR1AO95602 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC25.54■■□□□ 1.68
POLR1AO95602 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR1AO95602 AL390961.4-201ENST00000623958 2535 ntBASIC25.53■■□□□ 1.68
POLR1AO95602 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR1AO95602 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR1AO95602 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms