Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.97■□□□□ 0.47
USP1O94782 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 KRT8P47-201ENST00000604727 1398 ntBASIC17.97■□□□□ 0.47
USP1O94782 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 AC005521.1-201ENST00000393351 872 ntBASIC17.97■□□□□ 0.47
USP1O94782 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.97■□□□□ 0.47
USP1O94782 KRT18P48-201ENST00000434763 852 ntBASIC17.97■□□□□ 0.47
USP1O94782 BX664615.1-201ENST00000443558 458 ntBASIC17.97■□□□□ 0.47
USP1O94782 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 AC011558.1-201ENST00000623459 338 ntBASIC17.97■□□□□ 0.47
USP1O94782 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.97■□□□□ 0.47
USP1O94782 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.97■□□□□ 0.47
USP1O94782 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 AC073508.3-201ENST00000619697 1419 ntBASIC17.97■□□□□ 0.47
USP1O94782 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.97■□□□□ 0.47
USP1O94782 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
USP1O94782 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.96■□□□□ 0.47
USP1O94782 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.96■□□□□ 0.47
USP1O94782 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
USP1O94782 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.96■□□□□ 0.47
USP1O94782 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.96■□□□□ 0.47
USP1O94782 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.96■□□□□ 0.47
USP1O94782 AC009154.2-201ENST00000621177 724 ntBASIC17.96■□□□□ 0.47
USP1O94782 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 AL023806.1-201ENST00000603994 1649 ntBASIC17.96■□□□□ 0.47
USP1O94782 AL139384.1-201ENST00000612143 3047 ntBASIC17.96■□□□□ 0.47
USP1O94782 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP1O94782 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.95■□□□□ 0.46
USP1O94782 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
USP1O94782 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
USP1O94782 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 FAM8A6P-201ENST00000407496 1135 ntBASIC17.95■□□□□ 0.46
USP1O94782 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.95■□□□□ 0.46
USP1O94782 YBX1P2-201ENST00000489612 999 ntBASIC17.95■□□□□ 0.46
USP1O94782 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.95■□□□□ 0.46
USP1O94782 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
USP1O94782 AC139887.4-201ENST00000607877 719 ntBASIC17.95■□□□□ 0.46
USP1O94782 AC004263.2-201ENST00000617183 678 ntBASIC17.95■□□□□ 0.46
USP1O94782 LINC01451-201ENST00000623792 534 ntBASIC17.95■□□□□ 0.46
USP1O94782 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.95■□□□□ 0.46
USP1O94782 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
USP1O94782 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP1O94782 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
USP1O94782 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
USP1O94782 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
USP1O94782 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
USP1O94782 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP1O94782 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.95■□□□□ 0.46
USP1O94782 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms