Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NOC2LP1-202ENST00000452600 2235 ntBASIC17.89■□□□□ 0.45
SMAD6O43541 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 RNPS1P1-201ENST00000507437 918 ntBASIC17.89■□□□□ 0.45
SMAD6O43541 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.89■□□□□ 0.45
SMAD6O43541 AC109462.3-201ENST00000573934 613 ntBASIC17.89■□□□□ 0.45
SMAD6O43541 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.89■□□□□ 0.45
SMAD6O43541 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.89■□□□□ 0.45
SMAD6O43541 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 REXO1L11P-201ENST00000620964 1927 ntBASIC17.89■□□□□ 0.45
SMAD6O43541 AL356309.3-201ENST00000624132 1934 ntBASIC17.89■□□□□ 0.45
SMAD6O43541 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SMAD6O43541 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SMAD6O43541 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 AC004817.3-201ENST00000602957 2129 ntBASIC17.89■□□□□ 0.45
SMAD6O43541 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SMAD6O43541 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SMAD6O43541 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 AL353593.2-201ENST00000602529 1483 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.88■□□□□ 0.45
SMAD6O43541 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.88■□□□□ 0.45
SMAD6O43541 KRT18P67-201ENST00000432816 1264 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.88■□□□□ 0.45
SMAD6O43541 RNA5SP419-201ENST00000515908 135 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 AC021087.4-201ENST00000563761 564 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.88■□□□□ 0.45
SMAD6O43541 AC073592.5-201ENST00000624854 528 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 HLA-A-201ENST00000376802 1334 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.88■□□□□ 0.45
SMAD6O43541 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.88■□□□□ 0.45
SMAD6O43541 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 AC132938.5-201ENST00000624980 1813 ntBASIC17.88■□□□□ 0.45
SMAD6O43541 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMAD6O43541 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
SMAD6O43541 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
SMAD6O43541 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 AC018470.1-201ENST00000624790 3129 ntBASIC17.87■□□□□ 0.45
SMAD6O43541 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.87■□□□□ 0.45
SMAD6O43541 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.87■□□□□ 0.45
SMAD6O43541 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.87■□□□□ 0.45
SMAD6O43541 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.87■□□□□ 0.45
SMAD6O43541 HNRNPDP1-201ENST00000439535 754 ntBASIC17.87■□□□□ 0.45
SMAD6O43541 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.87■□□□□ 0.45
SMAD6O43541 SCARNA2-201ENST00000458748 420 ntBASIC17.87■□□□□ 0.45
SMAD6O43541 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SMAD6O43541 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.87■□□□□ 0.45
SMAD6O43541 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
SMAD6O43541 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.87■□□□□ 0.45
SMAD6O43541 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.87■□□□□ 0.45
SMAD6O43541 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.87■□□□□ 0.45
SMAD6O43541 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.87■□□□□ 0.45
SMAD6O43541 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 AC006116.8-202ENST00000587620 1550 ntBASIC17.87■□□□□ 0.45
SMAD6O43541 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.87■□□□□ 0.45
SMAD6O43541 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMAD6O43541 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.87■□□□□ 0.45
SMAD6O43541 AC079776.2-201ENST00000641154 1609 ntBASIC17.87■□□□□ 0.45
SMAD6O43541 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD6O43541 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD6O43541 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD6O43541 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SMAD6O43541 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD6O43541 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD6O43541 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD6O43541 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD6O43541 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms