Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
UBFD1O14562 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.2■□□□□ 0.34
UBFD1O14562 STARP1-201ENST00000397973 869 ntBASIC17.2■□□□□ 0.34
UBFD1O14562 AC005104.2-201ENST00000427818 678 ntBASIC17.2■□□□□ 0.34
UBFD1O14562 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.2■□□□□ 0.34
UBFD1O14562 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.2■□□□□ 0.34
UBFD1O14562 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.2■□□□□ 0.34
UBFD1O14562 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
UBFD1O14562 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.2■□□□□ 0.34
UBFD1O14562 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.2■□□□□ 0.34
UBFD1O14562 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBFD1O14562 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.2■□□□□ 0.34
UBFD1O14562 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.2■□□□□ 0.34
UBFD1O14562 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBFD1O14562 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.19■□□□□ 0.34
UBFD1O14562 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.19■□□□□ 0.34
UBFD1O14562 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
UBFD1O14562 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 IGHGP-201ENST00000390555 1178 ntBASIC17.19■□□□□ 0.34
UBFD1O14562 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.19■□□□□ 0.34
UBFD1O14562 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.19■□□□□ 0.34
UBFD1O14562 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.19■□□□□ 0.34
UBFD1O14562 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 AC139887.4-201ENST00000607877 719 ntBASIC17.19■□□□□ 0.34
UBFD1O14562 AL031432.5-201ENST00000641059 760 ntBASIC17.19■□□□□ 0.34
UBFD1O14562 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBFD1O14562 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
UBFD1O14562 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
UBFD1O14562 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 BX276092.7-203ENST00000637198 1536 ntBASIC17.18■□□□□ 0.34
UBFD1O14562 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
UBFD1O14562 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.18■□□□□ 0.34
UBFD1O14562 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.18■□□□□ 0.34
UBFD1O14562 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.18■□□□□ 0.34
UBFD1O14562 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.18■□□□□ 0.34
UBFD1O14562 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.18■□□□□ 0.34
UBFD1O14562 AC060834.1-201ENST00000443027 2032 ntBASIC17.18■□□□□ 0.34
UBFD1O14562 AC090340.1-201ENST00000620778 4980 ntBASIC17.18■□□□□ 0.34
UBFD1O14562 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBFD1O14562 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms