Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 DOC2GP-204ENST00000639052 2548 ntBASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 LINC00167-201ENST00000530583 1419 ntBASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM1B2RUZ4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 PCDH8P1-201ENST00000428983 2773 ntBASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AC010240.3-201ENST00000607688 395 ntBASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 AC016396.2-201ENST00000562575 1417 ntBASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SMIM1B2RUZ4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMIM1B2RUZ4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 AC116562.2-201ENST00000507042 360 ntBASIC12□□□□□ -0.49
SMIM1B2RUZ4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12□□□□□ -0.49
SMIM1B2RUZ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms