Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01549A6NIU2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 MIPEPP3-201ENST00000412105 444 ntBASIC12.64□□□□□ -0.39
LINC01549A6NIU2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01549A6NIU2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 DOC2GP-204ENST00000639052 2548 ntBASIC12.63□□□□□ -0.39
LINC01549A6NIU2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 MIR600HG-201ENST00000449175 5984 ntBASIC12.63□□□□□ -0.39
LINC01549A6NIU2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 AC004951.3-201ENST00000418645 1148 ntBASIC12.63□□□□□ -0.39
LINC01549A6NIU2 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 SOX15-203ENST00000570788 1093 ntBASIC12.63□□□□□ -0.39
LINC01549A6NIU2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
LINC01549A6NIU2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms