Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 PCDHA1-201ENST00000378133 2726 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 LINC02199-201ENST00000506655 2702 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 AL596257.1-201ENST00000641463 2694 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 AC022898.2-201ENST00000616822 1312 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 MIR3180-5-201ENST00000583743 153 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 AC130371.2-201ENST00000619443 611 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 AC132938.6-201ENST00000623828 1655 ntBASIC16.8■□□□□ 0.28
AP4S1Q9Y587 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4S1Q9Y587 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 AC026271.2-201ENST00000428091 497 ntBASIC16.79■□□□□ 0.28
AP4S1Q9Y587 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 RPS2P4-201ENST00000476944 856 ntBASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
AP4S1Q9Y587 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4S1Q9Y587 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms