Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF6Q9Y252 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF6Q9Y252 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 RCC2P3-201ENST00000418112 1537 ntBASIC16.75■□□□□ 0.27
RNF6Q9Y252 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 HBZP1-201ENST00000354915 429 ntBASIC16.75■□□□□ 0.27
RNF6Q9Y252 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 ATP5G2P1-201ENST00000433580 426 ntBASIC16.75■□□□□ 0.27
RNF6Q9Y252 SPDYE13P-201ENST00000445314 798 ntBASIC16.75■□□□□ 0.27
RNF6Q9Y252 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 AC034232.1-201ENST00000506026 1064 ntBASIC16.75■□□□□ 0.27
RNF6Q9Y252 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF6Q9Y252 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF6Q9Y252 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 AC026396.1-201ENST00000419388 421 ntBASIC16.74■□□□□ 0.27
RNF6Q9Y252 RASA4DP-201ENST00000460726 1199 ntBASIC16.74■□□□□ 0.27
RNF6Q9Y252 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 KRT18P41-201ENST00000518924 1277 ntBASIC16.74■□□□□ 0.27
RNF6Q9Y252 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 AC012313.10-201ENST00000623509 926 ntBASIC16.74■□□□□ 0.27
RNF6Q9Y252 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 AC022211.2-201ENST00000585075 2527 ntBASIC16.74■□□□□ 0.27
RNF6Q9Y252 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF6Q9Y252 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 PHGDH-209ENST00000641074 1780 ntBASIC16.74■□□□□ 0.27
RNF6Q9Y252 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF6Q9Y252 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF6Q9Y252 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF6Q9Y252 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF6Q9Y252 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF6Q9Y252 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF6Q9Y252 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 GPAT2P1-201ENST00000444924 1672 ntBASIC16.73■□□□□ 0.27
RNF6Q9Y252 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF6Q9Y252 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms