Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX6Q9UPM6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 LTB4R2-202ENST00000528054 3092 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 FAM86GP-201ENST00000448322 971 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 INGX-202ENST00000489074 768 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AC093214.1-201ENST00000511688 1107 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AL031432.2-201ENST00000566714 459 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AL928711.1-201ENST00000570165 459 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AC011467.2-201ENST00000598425 242 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AP000974.1-201ENST00000623909 2387 ntBASIC16.78■□□□□ 0.28
LHX6Q9UPM6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LHX6Q9UPM6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 AC007613.1-201ENST00000572811 2597 ntBASIC16.77■□□□□ 0.28
LHX6Q9UPM6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 CRYGEP-201ENST00000412192 528 ntBASIC16.77■□□□□ 0.28
LHX6Q9UPM6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 AC018845.2-201ENST00000568326 409 ntBASIC16.77■□□□□ 0.28
LHX6Q9UPM6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 GPR89P-201ENST00000407924 1495 ntBASIC16.77■□□□□ 0.28
LHX6Q9UPM6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LHX6Q9UPM6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LHX6Q9UPM6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.77■□□□□ 0.27
LHX6Q9UPM6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LHX6Q9UPM6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms