Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.49■□□□□ 0.39
VTI1BQ9UEU0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AC011676.5-201ENST00000624864 2660 ntBASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AP000523.1-201ENST00000398242 1049 ntBASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 KRT18P57-201ENST00000443599 1254 ntBASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 AC106820.2-201ENST00000563775 3264 ntBASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.48■□□□□ 0.39
VTI1BQ9UEU0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 AC009947.2-201ENST00000444014 672 ntBASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 KRT18P21-201ENST00000515767 1272 ntBASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 RN7SL850P-201ENST00000579959 291 ntBASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 AL031432.5-201ENST00000641059 760 ntBASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTI1BQ9UEU0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms