Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 AL732292.2-201ENST00000609649 430 ntBASIC18.69■□□□□ 0.58
CD248Q9HCU0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.69■□□□□ 0.58
CD248Q9HCU0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 FAAHP1-202ENST00000446499 1238 ntBASIC18.68■□□□□ 0.58
CD248Q9HCU0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 TOB2P1-201ENST00000469761 992 ntBASIC18.68■□□□□ 0.58
CD248Q9HCU0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 IFNL4P1-201ENST00000607083 540 ntBASIC18.68■□□□□ 0.58
CD248Q9HCU0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD248Q9HCU0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
CD248Q9HCU0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 AC004870.1-201ENST00000315132 882 ntBASIC18.67■□□□□ 0.58
CD248Q9HCU0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.67■□□□□ 0.58
CD248Q9HCU0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 AP003733.1-201ENST00000491725 852 ntBASIC18.67■□□□□ 0.58
CD248Q9HCU0 AC012615.1-201ENST00000565797 1299 ntBASIC18.67■□□□□ 0.58
CD248Q9HCU0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 AC104692.2-201ENST00000603054 253 ntBASIC18.67■□□□□ 0.58
CD248Q9HCU0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 AL596257.1-201ENST00000641463 2694 ntBASIC18.67■□□□□ 0.58
CD248Q9HCU0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms