Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AP000344.2-201ENST00000512987 629 ntBASIC19.31■□□□□ 0.68
HIPK3Q9H422 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.31■□□□□ 0.68
HIPK3Q9H422 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIPK3Q9H422 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 AL035633.1-201ENST00000406139 838 ntBASIC19.3■□□□□ 0.68
HIPK3Q9H422 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 ACTG1P14-201ENST00000446382 1122 ntBASIC19.3■□□□□ 0.68
HIPK3Q9H422 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HIPK3Q9H422 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIPK3Q9H422 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 DUTP2-201ENST00000519164 463 ntBASIC19.29■□□□□ 0.68
HIPK3Q9H422 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 SPCS2P1-201ENST00000561636 679 ntBASIC19.29■□□□□ 0.68
HIPK3Q9H422 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HIPK3Q9H422 PHGDH-209ENST00000641074 1780 ntBASIC19.29■□□□□ 0.68
HIPK3Q9H422 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIPK3Q9H422 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIPK3Q9H422 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.28■□□□□ 0.68
HIPK3Q9H422 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms