Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AC092338.2-201ENST00000568827 1415 ntBASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 LINC00304-203ENST00000565008 1864 ntBASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COMMD4Q9H0A8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD4Q9H0A8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 AP003071.4-201ENST00000562276 1284 ntBASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD4Q9H0A8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD4Q9H0A8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms