Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 HNRNPDP1-201ENST00000439535 754 ntBASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 AC093909.1-201ENST00000504731 1122 ntBASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 AC025062.2-201ENST00000605477 670 ntBASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 FAM215A-202ENST00000632077 792 ntBASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.07■□□□□ 0.96
CRNKL1Q9BZJ0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 SPDYE21P-201ENST00000413323 827 ntBASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 BX005266.1-201ENST00000473402 457 ntBASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 AC109462.3-201ENST00000573934 613 ntBASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 MTDHP4-201ENST00000600287 670 ntBASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRNKL1Q9BZJ0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 SIGLEC16-201ENST00000599858 1437 ntBASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 RPS2P28-201ENST00000314255 741 ntBASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 RPS2P1-201ENST00000434010 821 ntBASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 MIR7706-201ENST00000613747 67 ntBASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRNKL1Q9BZJ0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRNKL1Q9BZJ0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms