Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 HLA-F-220ENST00000434407 884 ntBASIC17.76■□□□□ 0.43
CPNE1Q99829 SLC25A3P1-201ENST00000443844 931 ntBASIC17.76■□□□□ 0.43
CPNE1Q99829 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 AC004263.2-201ENST00000617183 678 ntBASIC17.76■□□□□ 0.43
CPNE1Q99829 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE1Q99829 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 BX276092.7-203ENST00000637198 1536 ntBASIC17.76■□□□□ 0.43
CPNE1Q99829 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 AC022211.2-201ENST00000585075 2527 ntBASIC17.75■□□□□ 0.43
CPNE1Q99829 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPNE1Q99829 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPNE1Q99829 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE1Q99829 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.75■□□□□ 0.43
CPNE1Q99829 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 TSPY12P-201ENST00000421279 868 ntBASIC17.75■□□□□ 0.43
CPNE1Q99829 AL596275.1-201ENST00000423464 877 ntBASIC17.75■□□□□ 0.43
CPNE1Q99829 AC112698.1-201ENST00000510299 916 ntBASIC17.75■□□□□ 0.43
CPNE1Q99829 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.75■□□□□ 0.43
CPNE1Q99829 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE1Q99829 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CPNE1Q99829 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CPNE1Q99829 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE1Q99829 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE1Q99829 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE1Q99829 AC087499.1-201ENST00000418141 1075 ntBASIC17.74■□□□□ 0.43
CPNE1Q99829 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE1Q99829 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 COX11P1-201ENST00000489116 835 ntBASIC17.74■□□□□ 0.43
CPNE1Q99829 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE1Q99829 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CPNE1Q99829 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE1Q99829 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE1Q99829 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms