Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 AC246785.2-201ENST00000432512 513 ntBASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 AL138831.2-201ENST00000606564 490 ntBASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG4P5Q96PW8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 COX5BP2-201ENST00000392354 334 ntBASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 AC005104.2-201ENST00000427818 678 ntBASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 AC007967.3-201ENST00000434308 558 ntBASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 AP005901.3-202ENST00000581653 237 ntBASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG4P5Q96PW8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 KRT18P1-202ENST00000452408 1331 ntBASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 AC139713.2-201ENST00000641328 2723 ntBASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 AL138688.1-201ENST00000624851 1594 ntBASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG4P5Q96PW8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 DRAXINP1-201ENST00000437611 948 ntBASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms