Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
SNIP1Q8TAD8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SNIP1Q8TAD8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
SNIP1Q8TAD8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 ACTG1P14-201ENST00000446382 1122 ntBASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.7■□□□□ 0.26
SNIP1Q8TAD8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 KRT8P47-201ENST00000604727 1398 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AC092474.2-201ENST00000424288 719 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 IGHV3-65-201ENST00000523210 341 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 PDPK2P-202ENST00000562415 1191 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AL031432.2-201ENST00000566714 459 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AL928711.1-201ENST00000570165 459 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AC008667.4-201ENST00000607370 168 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 AC004817.3-201ENST00000602957 2129 ntBASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNIP1Q8TAD8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms