Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH19Q8TAB3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PCDH19Q8TAB3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 KRT8P26-201ENST00000534154 1276 ntBASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 AC124864.1-201ENST00000623408 392 ntBASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 BX276092.7-203ENST00000637198 1536 ntBASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH19Q8TAB3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 HCG4P8-203ENST00000443049 980 ntBASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AC090616.6-201ENST00000582640 721 ntBASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AC010460.3-201ENST00000511359 1579 ntBASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AL138688.1-201ENST00000624851 1594 ntBASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH19Q8TAB3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 AC108860.2-201ENST00000562760 2183 ntBASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 AC097374.2-201ENST00000618617 1306 ntBASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 IGHV3-41-201ENST00000613121 348 ntBASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 LTB4R2-202ENST00000528054 3092 ntBASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH19Q8TAB3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms