Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC71Q8IV32 AL109659.2-201ENST00000606809 1674 ntBASIC16.68■□□□□ 0.26
CCDC71Q8IV32 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC71Q8IV32 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 AL023806.1-201ENST00000603994 1649 ntBASIC16.67■□□□□ 0.26
CCDC71Q8IV32 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 MCCD1P1-208ENST00000445732 328 ntBASIC16.67■□□□□ 0.26
CCDC71Q8IV32 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71Q8IV32 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 MIR3180-5-201ENST00000583743 153 ntBASIC16.66■□□□□ 0.26
CCDC71Q8IV32 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 AL691432.3-201ENST00000621860 400 ntBASIC16.66■□□□□ 0.26
CCDC71Q8IV32 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71Q8IV32 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 KRT18P55-202ENST00000578578 1546 ntBASIC16.65■□□□□ 0.26
CCDC71Q8IV32 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 AC092329.2-201ENST00000598402 547 ntBASIC16.65■□□□□ 0.26
CCDC71Q8IV32 NPAP1P7-201ENST00000613027 823 ntBASIC16.65■□□□□ 0.26
CCDC71Q8IV32 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71Q8IV32 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms