Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 RPS2P55-201ENST00000397318 883 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 DDX43P3-201ENST00000441064 443 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 AC107956.1-201ENST00000494359 873 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 BX088651.1-201ENST00000540551 451 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 AC008687.5-201ENST00000593746 558 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 AC046158.3-201ENST00000624947 2558 ntBASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRTM1Q86UE6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM1Q86UE6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AC105020.1-201ENST00000435356 2205 ntBASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AC060834.1-201ENST00000443027 2032 ntBASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AC018695.7-201ENST00000624587 2492 ntBASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 UBALD1-205ENST00000590891 2641 ntBASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRRTM1Q86UE6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms