Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
COPS6Q7L5N1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 KLF4P1-201ENST00000412782 1185 ntBASIC22.33■■□□□ 1.17
COPS6Q7L5N1 AC009947.1-201ENST00000444350 727 ntBASIC22.33■■□□□ 1.17
COPS6Q7L5N1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 STK25P1-201ENST00000585406 838 ntBASIC22.33■■□□□ 1.17
COPS6Q7L5N1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 AC006557.2-201ENST00000592985 1240 ntBASIC22.33■■□□□ 1.17
COPS6Q7L5N1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
COPS6Q7L5N1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COPS6Q7L5N1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COPS6Q7L5N1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
COPS6Q7L5N1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COPS6Q7L5N1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
COPS6Q7L5N1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 AC138028.4-201ENST00000564984 1845 ntBASIC22.32■■□□□ 1.16
COPS6Q7L5N1 AC003669.1-201ENST00000334569 611 ntBASIC22.32■■□□□ 1.16
COPS6Q7L5N1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 AC004706.3-202ENST00000621574 984 ntBASIC22.32■■□□□ 1.16
COPS6Q7L5N1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COPS6Q7L5N1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 FAM197Y3-203ENST00000618346 717 ntBASIC22.31■■□□□ 1.16
COPS6Q7L5N1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COPS6Q7L5N1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 BICD1-207ENST00000551848 1962 ntBASIC22.3■■□□□ 1.16
COPS6Q7L5N1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 AC006504.4-201ENST00000592118 1568 ntBASIC22.3■■□□□ 1.16
COPS6Q7L5N1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 KRT18P13-201ENST00000400056 1290 ntBASIC22.3■■□□□ 1.16
COPS6Q7L5N1 MED15P5-201ENST00000423150 992 ntBASIC22.3■■□□□ 1.16
COPS6Q7L5N1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 SIGLEC30P-201ENST00000455569 941 ntBASIC22.3■■□□□ 1.16
COPS6Q7L5N1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS6Q7L5N1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms