Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 AC139887.4-201ENST00000607877 719 ntBASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF111Q6ZNA4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AP000593.1-201ENST00000393668 712 ntBASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AK4P3-201ENST00000418260 669 ntBASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AC117947.1-201ENST00000427448 529 ntBASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 YBX1P2-201ENST00000489612 999 ntBASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 KRT18P41-201ENST00000518924 1277 ntBASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 AC024243.1-201ENST00000609234 778 ntBASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF111Q6ZNA4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF111Q6ZNA4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF111Q6ZNA4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF111Q6ZNA4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
RNF111Q6ZNA4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 AC006011.2-201ENST00000621313 1158 ntBASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 PCDHA14-201ENST00000506751 2298 ntBASIC17.26■□□□□ 0.35
RNF111Q6ZNA4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF111Q6ZNA4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms