Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 AC096633.1-201ENST00000422446 749 ntBASIC20.02■□□□□ 0.8
SHC4Q6S5L8 AC092647.4-201ENST00000457211 535 ntBASIC20.02■□□□□ 0.8
SHC4Q6S5L8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.02■□□□□ 0.8
SHC4Q6S5L8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.02■□□□□ 0.79
SHC4Q6S5L8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 AC010460.3-201ENST00000511359 1579 ntBASIC20.01■□□□□ 0.79
SHC4Q6S5L8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 RN7SL850P-201ENST00000579959 291 ntBASIC20.01■□□□□ 0.79
SHC4Q6S5L8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.01■□□□□ 0.79
SHC4Q6S5L8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SHC4Q6S5L8 AC099398.1-201ENST00000567919 2776 ntBASIC20■□□□□ 0.79
SHC4Q6S5L8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SHC4Q6S5L8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 AD000864.1-201ENST00000624076 2295 ntBASIC20■□□□□ 0.79
SHC4Q6S5L8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20■□□□□ 0.79
SHC4Q6S5L8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 AC022616.7-201ENST00000525383 220 ntBASIC20■□□□□ 0.79
SHC4Q6S5L8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20■□□□□ 0.79
SHC4Q6S5L8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20■□□□□ 0.79
SHC4Q6S5L8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20■□□□□ 0.79
SHC4Q6S5L8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHC4Q6S5L8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20■□□□□ 0.79
SHC4Q6S5L8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20■□□□□ 0.79
SHC4Q6S5L8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC4Q6S5L8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms