Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 AC008556.1-201ENST00000610908 2040 ntBASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM88Q6PEY1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 AC006449.5-201ENST00000610658 2098 ntBASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM88Q6PEY1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 AC083880.1-201ENST00000608266 535 ntBASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM88Q6PEY1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms