Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AL355306.1-201ENST00000415580 579 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 KRT18P32-201ENST00000424695 1287 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AL671277.1-201ENST00000429656 993 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AL592309.1-201ENST00000443127 649 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AL513480.1-201ENST00000451731 511 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AC125807.1-201ENST00000483097 614 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 FO538757.1-201ENST00000623083 1397 ntBASIC18.17■□□□□ 0.5
PTCRAQ6ISU1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 FAM185BP-201ENST00000443595 716 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 CRB3P1-201ENST00000449338 276 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 IGHV3-42-201ENST00000520410 361 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AP001059.3-201ENST00000619053 235 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 AL390754.1-201ENST00000619088 582 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTCRAQ6ISU1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 LINC00982-205ENST00000420957 435 ntBASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 AL512638.1-201ENST00000457493 794 ntBASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 AC022494.1-201ENST00000466044 728 ntBASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 AC005082.1-201ENST00000413042 2259 ntBASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTCRAQ6ISU1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms