Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF20Q5VTR2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF20Q5VTR2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF20Q5VTR2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF20Q5VTR2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 REXO1L11P-201ENST00000620964 1927 ntBASIC21.2■□□□□ 0.98
RNF20Q5VTR2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 AC090616.6-201ENST00000582640 721 ntBASIC21.2■□□□□ 0.98
RNF20Q5VTR2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.2■□□□□ 0.98
RNF20Q5VTR2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF20Q5VTR2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 AC096633.1-201ENST00000422446 749 ntBASIC21.19■□□□□ 0.98
RNF20Q5VTR2 KRT8P26-201ENST00000534154 1276 ntBASIC21.19■□□□□ 0.98
RNF20Q5VTR2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 NTF6B-201ENST00000591913 560 ntBASIC21.19■□□□□ 0.98
RNF20Q5VTR2 AL590326.2-201ENST00000625139 305 ntBASIC21.19■□□□□ 0.98
RNF20Q5VTR2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.19■□□□□ 0.98
RNF20Q5VTR2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF20Q5VTR2 AL138688.1-201ENST00000624851 1594 ntBASIC21.19■□□□□ 0.98
RNF20Q5VTR2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF20Q5VTR2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms