Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 AC034232.1-201ENST00000506026 1064 ntBASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 GCSHP2-201ENST00000560971 527 ntBASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 AC009154.2-201ENST00000621177 724 ntBASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 BX276092.7-203ENST00000637198 1536 ntBASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 LYSMD4-203ENST00000378904 2122 ntBASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 AC141257.4-201ENST00000634557 245 ntBASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 AC136944.6-201ENST00000634818 245 ntBASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIF1Q5T3J3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 AC079602.3-201ENST00000623931 403 ntBASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRIF1Q5T3J3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms