Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN20Q4JDL3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 FZD10-202ENST00000539839 3282 ntBASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 COX5BP2-201ENST00000392354 334 ntBASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 AC005104.2-201ENST00000427818 678 ntBASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 UPK3BP1-201ENST00000428678 509 ntBASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 VENTXP7-201ENST00000475503 772 ntBASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 LINC01451-201ENST00000623792 534 ntBASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN20Q4JDL3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 Z69720.1-201ENST00000601483 472 ntBASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN20Q4JDL3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 IGHV3-47-201ENST00000425060 335 ntBASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms