Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RPL39P62891 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RPL39P62891 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.59□□□□□ -0.39
RPL39P62891 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RPL39P62891 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RPL39P62891 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.59□□□□□ -0.39
RPL39P62891 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RPL39P62891 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RPL39P62891 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.59□□□□□ -0.39
RPL39P62891 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RPL39P62891 HLA-J-201ENST00000462773 1622 ntBASIC12.59□□□□□ -0.39
RPL39P62891 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.58□□□□□ -0.39
RPL39P62891 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RPL39P62891 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.58□□□□□ -0.39
RPL39P62891 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.58□□□□□ -0.39
RPL39P62891 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
RPL39P62891 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
RPL39P62891 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.58□□□□□ -0.4
RPL39P62891 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 KRT18P23-201ENST00000435622 1283 ntBASIC12.58□□□□□ -0.4
RPL39P62891 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
RPL39P62891 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.58□□□□□ -0.4
RPL39P62891 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.58□□□□□ -0.4
RPL39P62891 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RPL39P62891 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.58□□□□□ -0.4
RPL39P62891 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 AC132938.6-201ENST00000623828 1655 ntBASIC12.57□□□□□ -0.4
RPL39P62891 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.57□□□□□ -0.4
RPL39P62891 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RPL39P62891 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RPL39P62891 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RPL39P62891 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 AL353807.1-201ENST00000427475 662 ntBASIC12.57□□□□□ -0.4
RPL39P62891 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 DUTP2-201ENST00000519164 463 ntBASIC12.57□□□□□ -0.4
RPL39P62891 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.57□□□□□ -0.4
RPL39P62891 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.57□□□□□ -0.4
RPL39P62891 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 AP000692.2-201ENST00000608391 879 ntBASIC12.57□□□□□ -0.4
RPL39P62891 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.57□□□□□ -0.4
RPL39P62891 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RPL39P62891 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RPL39P62891 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms