Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS1BP61024 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 RCC2P6-201ENST00000526625 1557 ntBASIC12.48□□□□□ -0.41
CKS1BP61024 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CKS1BP61024 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.48□□□□□ -0.41
CKS1BP61024 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 AC092437.1-201ENST00000624794 1048 ntBASIC12.48□□□□□ -0.41
CKS1BP61024 MYC-209ENST00000641252 345 ntBASIC12.48□□□□□ -0.41
CKS1BP61024 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 LINC02199-201ENST00000506655 2702 ntBASIC12.48□□□□□ -0.41
CKS1BP61024 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CKS1BP61024 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS1BP61024 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS1BP61024 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS1BP61024 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.47□□□□□ -0.41
CKS1BP61024 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 AC112777.1-201ENST00000540175 1423 ntBASIC12.47□□□□□ -0.41
CKS1BP61024 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
CKS1BP61024 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CKS1BP61024 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.47□□□□□ -0.41
CKS1BP61024 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.47□□□□□ -0.41
CKS1BP61024 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS1BP61024 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS1BP61024 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS1BP61024 C1QL1P1-201ENST00000568105 661 ntBASIC12.47□□□□□ -0.41
CKS1BP61024 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms