Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.54■□□□□ 0.56
MTHFRP42898 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTHFRP42898 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTHFRP42898 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTHFRP42898 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTHFRP42898 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.54■□□□□ 0.56
MTHFRP42898 AC004817.3-201ENST00000602957 2129 ntBASIC18.53■□□□□ 0.56
MTHFRP42898 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.53■□□□□ 0.56
MTHFRP42898 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.53■□□□□ 0.56
MTHFRP42898 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.53■□□□□ 0.56
MTHFRP42898 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.53■□□□□ 0.56
MTHFRP42898 AL645939.2-201ENST00000427340 991 ntBASIC18.53■□□□□ 0.56
MTHFRP42898 CNN2P11-201ENST00000429351 262 ntBASIC18.53■□□□□ 0.56
MTHFRP42898 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 MKNK2P1-201ENST00000437526 628 ntBASIC18.53■□□□□ 0.56
MTHFRP42898 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.53■□□□□ 0.56
MTHFRP42898 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MTHFRP42898 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 AC004706.3-202ENST00000621574 984 ntBASIC18.53■□□□□ 0.56
MTHFRP42898 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MTHFRP42898 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
MTHFRP42898 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTHFRP42898 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MTHFRP42898 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.52■□□□□ 0.56
MTHFRP42898 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.52■□□□□ 0.56
MTHFRP42898 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MTHFRP42898 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.52■□□□□ 0.56
MTHFRP42898 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MTHFRP42898 HTR5BP-201ENST00000430851 1154 ntBASIC18.52■□□□□ 0.56
MTHFRP42898 VN2R19P-201ENST00000442399 1052 ntBASIC18.52■□□□□ 0.56
MTHFRP42898 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
MTHFRP42898 MIR4751-201ENST00000578027 74 ntBASIC18.52■□□□□ 0.56
MTHFRP42898 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.52■□□□□ 0.56
MTHFRP42898 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.52■□□□□ 0.56
MTHFRP42898 AC073592.5-201ENST00000624854 528 ntBASIC18.52■□□□□ 0.56
MTHFRP42898 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTHFRP42898 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
MTHFRP42898 KRT8P47-201ENST00000604727 1398 ntBASIC18.52■□□□□ 0.55
MTHFRP42898 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MTHFRP42898 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MTHFRP42898 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MTHFRP42898 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MTHFRP42898 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
MTHFRP42898 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
MTHFRP42898 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
MTHFRP42898 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MTHFRP42898 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MTHFRP42898 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MTHFRP42898 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MTHFRP42898 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MTHFRP42898 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.51■□□□□ 0.55
MTHFRP42898 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MTHFRP42898 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MTHFRP42898 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.51■□□□□ 0.55
MTHFRP42898 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MTHFRP42898 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
MTHFRP42898 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.51■□□□□ 0.55
MTHFRP42898 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.51■□□□□ 0.55
MTHFRP42898 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MTHFRP42898 AP002472.1-201ENST00000577490 586 ntBASIC18.51■□□□□ 0.55
MTHFRP42898 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.51■□□□□ 0.55
MTHFRP42898 AC092865.6-201ENST00000642101 219 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms