Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TM4SF1P30408 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
TM4SF1P30408 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.91■■□□□ 1.1
TM4SF1P30408 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.91■■□□□ 1.1
TM4SF1P30408 AC093520.2-201ENST00000561830 333 ntBASIC21.91■■□□□ 1.1
TM4SF1P30408 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.91■■□□□ 1.1
TM4SF1P30408 AL390955.2-201ENST00000603032 514 ntBASIC21.91■■□□□ 1.1
TM4SF1P30408 LINC00628-201ENST00000628516 1289 ntBASIC21.91■■□□□ 1.1
TM4SF1P30408 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TM4SF1P30408 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TM4SF1P30408 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.9■■□□□ 1.1
TM4SF1P30408 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC244107.1-201ENST00000442033 332 ntBASIC21.9■■□□□ 1.1
TM4SF1P30408 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC023141.5-201ENST00000458585 616 ntBASIC21.9■■□□□ 1.1
TM4SF1P30408 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF1P30408 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.9■■□□□ 1.1
TM4SF1P30408 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.9■■□□□ 1.1
TM4SF1P30408 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TM4SF1P30408 AC092919.2-201ENST00000623631 1645 ntBASIC21.9■■□□□ 1.1
TM4SF1P30408 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM4SF1P30408 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF1P30408 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.89■■□□□ 1.1
TM4SF1P30408 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.89■■□□□ 1.1
TM4SF1P30408 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF1P30408 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF1P30408 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
TM4SF1P30408 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF1P30408 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF1P30408 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM4SF1P30408 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.89■■□□□ 1.1
TM4SF1P30408 AL590787.1-201ENST00000568856 1315 ntBASIC21.89■■□□□ 1.1
TM4SF1P30408 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TM4SF1P30408 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TM4SF1P30408 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.89■■□□□ 1.09
TM4SF1P30408 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.89■■□□□ 1.09
TM4SF1P30408 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.89■■□□□ 1.09
TM4SF1P30408 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
TM4SF1P30408 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 MIR4745-201ENST00000577608 62 ntBASIC21.89■■□□□ 1.09
TM4SF1P30408 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.89■■□□□ 1.09
TM4SF1P30408 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TM4SF1P30408 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.89■■□□□ 1.09
TM4SF1P30408 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM4SF1P30408 PI4KAP1-204ENST00000612579 1703 ntBASIC21.89■■□□□ 1.09
TM4SF1P30408 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.88■■□□□ 1.09
TM4SF1P30408 AC100803.2-201ENST00000562459 1963 ntBASIC21.88■■□□□ 1.09
TM4SF1P30408 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.88■■□□□ 1.09
TM4SF1P30408 AC006116.8-202ENST00000587620 1550 ntBASIC21.88■■□□□ 1.09
TM4SF1P30408 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
TM4SF1P30408 AC092474.2-201ENST00000424288 719 ntBASIC21.88■■□□□ 1.09
TM4SF1P30408 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.88■■□□□ 1.09
TM4SF1P30408 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF1P30408 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 AC015911.4-201ENST00000588022 1070 ntBASIC21.88■■□□□ 1.09
TM4SF1P30408 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TM4SF1P30408 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF1P30408 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.88■■□□□ 1.09
TM4SF1P30408 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TM4SF1P30408 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM4SF1P30408 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF1P30408 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF1P30408 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF1P30408 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM4SF1P30408 BX276092.7-203ENST00000637198 1536 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms