Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
MMP11P24347 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP11P24347 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP11P24347 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP11P24347 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP11P24347 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
MMP11P24347 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP11P24347 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MMP11P24347 MIR5100-201ENST00000579544 119 ntBASIC16.87■□□□□ 0.29
MMP11P24347 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.87■□□□□ 0.29
MMP11P24347 AL591684.3-201ENST00000605187 298 ntBASIC16.87■□□□□ 0.29
MMP11P24347 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MMP11P24347 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
MMP11P24347 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
MMP11P24347 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP11P24347 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP11P24347 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 GMCL1P1-201ENST00000463439 1581 ntBASIC16.86■□□□□ 0.29
MMP11P24347 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 AKR1C7P-201ENST00000305623 895 ntBASIC16.86■□□□□ 0.29
MMP11P24347 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP11P24347 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MMP11P24347 AC009078.2-202ENST00000463353 338 ntBASIC16.86■□□□□ 0.29
MMP11P24347 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.86■□□□□ 0.29
MMP11P24347 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 AC005336.2-201ENST00000593183 939 ntBASIC16.86■□□□□ 0.29
MMP11P24347 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MMP11P24347 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MMP11P24347 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP11P24347 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP11P24347 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MMP11P24347 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP11P24347 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP11P24347 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP11P24347 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP11P24347 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.85■□□□□ 0.29
MMP11P24347 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MMP11P24347 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.85■□□□□ 0.29
MMP11P24347 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.85■□□□□ 0.29
MMP11P24347 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP11P24347 AP002469.2-201ENST00000531724 424 ntBASIC16.85■□□□□ 0.29
MMP11P24347 AC009533.2-201ENST00000543664 586 ntBASIC16.85■□□□□ 0.29
MMP11P24347 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.85■□□□□ 0.29
MMP11P24347 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP11P24347 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MMP11P24347 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP11P24347 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP11P24347 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
MMP11P24347 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP11P24347 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms