Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 PCDHA14-201ENST00000506751 2298 ntBASIC16.79■□□□□ 0.28
MT-ND1P03886 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND1P03886 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ND1P03886 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 LINC00304-203ENST00000565008 1864 ntBASIC16.78■□□□□ 0.28
MT-ND1P03886 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
MT-ND1P03886 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MT-ND1P03886 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ND1P03886 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND1P03886 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.78■□□□□ 0.28
MT-ND1P03886 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.78■□□□□ 0.28
MT-ND1P03886 Z99916.2-201ENST00000604037 246 ntBASIC16.78■□□□□ 0.28
MT-ND1P03886 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ND1P03886 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ND1P03886 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND1P03886 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND1P03886 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.78■□□□□ 0.28
MT-ND1P03886 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND1P03886 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.77■□□□□ 0.28
MT-ND1P03886 AGGF1P2-201ENST00000426656 2106 ntBASIC16.77■□□□□ 0.28
MT-ND1P03886 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 KRT18P23-201ENST00000435622 1283 ntBASIC16.77■□□□□ 0.28
MT-ND1P03886 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.77■□□□□ 0.28
MT-ND1P03886 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND1P03886 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 AP003071.4-201ENST00000562276 1284 ntBASIC16.77■□□□□ 0.28
MT-ND1P03886 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND1P03886 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
MT-ND1P03886 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MT-ND1P03886 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.77■□□□□ 0.27
MT-ND1P03886 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND1P03886 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND1P03886 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND1P03886 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND1P03886 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND1P03886 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.77■□□□□ 0.27
MT-ND1P03886 AC046158.3-201ENST00000624947 2558 ntBASIC16.77■□□□□ 0.27
MT-ND1P03886 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MT-ND1P03886 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND1P03886 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms