Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.62■□□□□ 0.57
APOEP02649 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 AL845331.1-201ENST00000424978 1190 ntBASIC18.62■□□□□ 0.57
APOEP02649 KRT17P6-201ENST00000453795 1220 ntBASIC18.62■□□□□ 0.57
APOEP02649 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.62■□□□□ 0.57
APOEP02649 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
APOEP02649 AL353801.3-201ENST00000609898 542 ntBASIC18.62■□□□□ 0.57
APOEP02649 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.62■□□□□ 0.57
APOEP02649 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.62■□□□□ 0.57
APOEP02649 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.62■□□□□ 0.57
APOEP02649 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
APOEP02649 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APOEP02649 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
APOEP02649 AC134043.2-201ENST00000624206 2238 ntBASIC18.62■□□□□ 0.57
APOEP02649 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOEP02649 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
APOEP02649 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.61■□□□□ 0.57
APOEP02649 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.61■□□□□ 0.57
APOEP02649 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.61■□□□□ 0.57
APOEP02649 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.61■□□□□ 0.57
APOEP02649 PRELID1P1-202ENST00000567272 903 ntBASIC18.61■□□□□ 0.57
APOEP02649 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.61■□□□□ 0.57
APOEP02649 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOEP02649 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APOEP02649 GNAS-203ENST00000306120 1878 ntBASIC18.6■□□□□ 0.57
APOEP02649 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.6■□□□□ 0.57
APOEP02649 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
APOEP02649 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.6■□□□□ 0.57
APOEP02649 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 MINOS1P3-201ENST00000457048 203 ntBASIC18.6■□□□□ 0.57
APOEP02649 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.6■□□□□ 0.57
APOEP02649 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.6■□□□□ 0.57
APOEP02649 CLEC4GP1-201ENST00000596555 870 ntBASIC18.6■□□□□ 0.57
APOEP02649 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.6■□□□□ 0.57
APOEP02649 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.6■□□□□ 0.57
APOEP02649 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
APOEP02649 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOEP02649 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.59■□□□□ 0.57
APOEP02649 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms