Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP3BO95985 RNF126P1-202ENST00000569893 925 ntBASIC18.22■□□□□ 0.51
TOP3BO95985 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.22■□□□□ 0.51
TOP3BO95985 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.22■□□□□ 0.51
TOP3BO95985 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.22■□□□□ 0.51
TOP3BO95985 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP3BO95985 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP3BO95985 AL645608.8-201ENST00000606034 2086 ntBASIC18.22■□□□□ 0.51
TOP3BO95985 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.22■□□□□ 0.51
TOP3BO95985 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP3BO95985 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP3BO95985 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.21■□□□□ 0.51
TOP3BO95985 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 FAM220CP-201ENST00000395253 831 ntBASIC18.21■□□□□ 0.51
TOP3BO95985 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.21■□□□□ 0.51
TOP3BO95985 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP3BO95985 RNA5SP419-201ENST00000515908 135 ntBASIC18.21■□□□□ 0.51
TOP3BO95985 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP3BO95985 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.21■□□□□ 0.51
TOP3BO95985 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.21■□□□□ 0.51
TOP3BO95985 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP3BO95985 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP3BO95985 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP3BO95985 AC036111.1-201ENST00000533973 1582 ntBASIC18.21■□□□□ 0.51
TOP3BO95985 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 AC099398.1-201ENST00000567919 2776 ntBASIC18.2■□□□□ 0.5
TOP3BO95985 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 AC034236.2-201ENST00000606662 1610 ntBASIC18.2■□□□□ 0.5
TOP3BO95985 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP3BO95985 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.2■□□□□ 0.5
TOP3BO95985 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.2■□□□□ 0.5
TOP3BO95985 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.2■□□□□ 0.5
TOP3BO95985 SLC25A6P5-201ENST00000435663 894 ntBASIC18.2■□□□□ 0.5
TOP3BO95985 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP3BO95985 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TOP3BO95985 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP3BO95985 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP3BO95985 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TOP3BO95985 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.2■□□□□ 0.5
TOP3BO95985 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOP3BO95985 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.19■□□□□ 0.5
TOP3BO95985 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TOP3BO95985 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.19■□□□□ 0.5
TOP3BO95985 PCDHA12-202ENST00000613593 2588 ntBASIC18.19■□□□□ 0.5
TOP3BO95985 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TOP3BO95985 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOP3BO95985 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.19■□□□□ 0.5
TOP3BO95985 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.19■□□□□ 0.5
TOP3BO95985 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.19■□□□□ 0.5
TOP3BO95985 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.19■□□□□ 0.5
TOP3BO95985 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms