Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MBD4O95243 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.17■□□□□ 0.98
MBD4O95243 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.17■□□□□ 0.98
MBD4O95243 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
MBD4O95243 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.17■□□□□ 0.98
MBD4O95243 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD4O95243 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD4O95243 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
MBD4O95243 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD4O95243 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD4O95243 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MBD4O95243 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MBD4O95243 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.17■□□□□ 0.98
MBD4O95243 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD4O95243 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MBD4O95243 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 AC007613.1-201ENST00000572811 2597 ntBASIC21.16■□□□□ 0.98
MBD4O95243 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 AL049757.1-201ENST00000616842 1596 ntBASIC21.16■□□□□ 0.98
MBD4O95243 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.16■□□□□ 0.98
MBD4O95243 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 FAM197Y8-203ENST00000450145 560 ntBASIC21.16■□□□□ 0.98
MBD4O95243 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 SART3-203ENST00000546611 1184 ntBASIC21.16■□□□□ 0.98
MBD4O95243 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.16■□□□□ 0.98
MBD4O95243 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 SLC25A6P4-201ENST00000586535 553 ntBASIC21.16■□□□□ 0.98
MBD4O95243 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.16■□□□□ 0.98
MBD4O95243 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MBD4O95243 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
MBD4O95243 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 AC012317.2-201ENST00000623305 2251 ntBASIC21.16■□□□□ 0.98
MBD4O95243 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MBD4O95243 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MBD4O95243 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MBD4O95243 PMPCAP1-201ENST00000508114 1576 ntBASIC21.15■□□□□ 0.98
MBD4O95243 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MBD4O95243 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 NOC2LP1-202ENST00000452600 2235 ntBASIC21.15■□□□□ 0.98
MBD4O95243 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MBD4O95243 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 AC103564.2-201ENST00000432853 1299 ntBASIC21.15■□□□□ 0.98
MBD4O95243 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.15■□□□□ 0.98
MBD4O95243 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
MBD4O95243 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MBD4O95243 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD4O95243 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
MBD4O95243 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
MBD4O95243 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MBD4O95243 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.14■□□□□ 0.98
MBD4O95243 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.14■□□□□ 0.98
MBD4O95243 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MBD4O95243 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
MBD4O95243 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MBD4O95243 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.14■□□□□ 0.97
MBD4O95243 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MBD4O95243 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
MBD4O95243 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MBD4O95243 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MBD4O95243 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
MBD4O95243 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.14■□□□□ 0.97
MBD4O95243 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.14■□□□□ 0.97
MBD4O95243 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.14■□□□□ 0.97
MBD4O95243 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.14■□□□□ 0.97
MBD4O95243 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MBD4O95243 AC148477.8-201ENST00000624298 468 ntBASIC21.14■□□□□ 0.97
MBD4O95243 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MBD4O95243 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.14■□□□□ 0.97
MBD4O95243 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MBD4O95243 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MBD4O95243 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
MBD4O95243 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms