Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
BEST1O76090 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 PMPCAP1-201ENST00000508114 1576 ntBASIC18.62■□□□□ 0.57
BEST1O76090 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BEST1O76090 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BEST1O76090 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BEST1O76090 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BEST1O76090 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BEST1O76090 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.61■□□□□ 0.57
BEST1O76090 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST1O76090 AP002469.2-201ENST00000531724 424 ntBASIC18.61■□□□□ 0.57
BEST1O76090 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
BEST1O76090 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.61■□□□□ 0.57
BEST1O76090 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.61■□□□□ 0.57
BEST1O76090 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BEST1O76090 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 RBM17P3-201ENST00000417687 1192 ntBASIC18.6■□□□□ 0.57
BEST1O76090 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.6■□□□□ 0.57
BEST1O76090 AC103564.2-201ENST00000432853 1299 ntBASIC18.6■□□□□ 0.57
BEST1O76090 SLC25A6P5-201ENST00000435663 894 ntBASIC18.6■□□□□ 0.57
BEST1O76090 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BEST1O76090 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 AC109462.3-201ENST00000573934 613 ntBASIC18.6■□□□□ 0.57
BEST1O76090 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.6■□□□□ 0.57
BEST1O76090 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BEST1O76090 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.6■□□□□ 0.57
BEST1O76090 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BEST1O76090 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 AL353593.2-201ENST00000602529 1483 ntBASIC18.59■□□□□ 0.57
BEST1O76090 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.59■□□□□ 0.57
BEST1O76090 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 AC067852.2-201ENST00000590513 2313 ntBASIC18.59■□□□□ 0.57
BEST1O76090 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.59■□□□□ 0.57
BEST1O76090 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 MRPL3P1-201ENST00000400109 1033 ntBASIC18.59■□□□□ 0.57
BEST1O76090 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.59■□□□□ 0.57
BEST1O76090 FDX1P1-201ENST00000449115 551 ntBASIC18.59■□□□□ 0.57
BEST1O76090 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms