Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 LINC00982-205ENST00000420957 435 ntBASIC22.54■■□□□ 1.2
SIPA1L3O60292 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 AP001160.2-201ENST00000596071 487 ntBASIC22.54■■□□□ 1.2
SIPA1L3O60292 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SIPA1L3O60292 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.54■■□□□ 1.2
SIPA1L3O60292 SLC25A1P3-201ENST00000395415 828 ntBASIC22.53■■□□□ 1.2
SIPA1L3O60292 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIPA1L3O60292 AC092183.1-201ENST00000469884 875 ntBASIC22.53■■□□□ 1.2
SIPA1L3O60292 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 AL691403.2-201ENST00000618460 490 ntBASIC22.53■■□□□ 1.2
SIPA1L3O60292 AC004790.2-201ENST00000623588 572 ntBASIC22.53■■□□□ 1.2
SIPA1L3O60292 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIPA1L3O60292 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIPA1L3O60292 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIPA1L3O60292 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIPA1L3O60292 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIPA1L3O60292 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.53■■□□□ 1.2
SIPA1L3O60292 RHOQP3-201ENST00000437982 621 ntBASIC22.53■■□□□ 1.2
SIPA1L3O60292 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.53■■□□□ 1.2
SIPA1L3O60292 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 AC004408.2-201ENST00000623613 2777 ntBASIC22.52■■□□□ 1.2
SIPA1L3O60292 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIPA1L3O60292 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SIPA1L3O60292 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.52■■□□□ 1.19
SIPA1L3O60292 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 ABALON-201ENST00000629058 1903 ntBASIC22.51■■□□□ 1.19
SIPA1L3O60292 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 AC027612.4-201ENST00000605371 583 ntBASIC22.51■■□□□ 1.19
SIPA1L3O60292 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIPA1L3O60292 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 AL135999.2-201ENST00000622438 1686 ntBASIC22.51■■□□□ 1.19
SIPA1L3O60292 AC104581.1-202ENST00000635932 2618 ntBASIC22.51■■□□□ 1.19
SIPA1L3O60292 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIPA1L3O60292 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SIPA1L3O60292 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIPA1L3O60292 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIPA1L3O60292 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SIPA1L3O60292 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIPA1L3O60292 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.5■■□□□ 1.19
SIPA1L3O60292 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms